RNA FISH probe counting

Software to assist with the enumeration of single molecule RNA probes. It operates on microscope data files, eventually outputting an annotated image showing a projection of the data with suggested cell boundaries and probe counts and areas (in pixels) for those cells.
Project supporting
- Stefanie Rosa
- Susan Duncan
- Caroline Dean
Links
- Publication DOI: 10.1186/s13007-016-0114-x
- Source code: https://github.com/JIC-CSB/FISHcount