jicbioimage: a tool for automated and reproducible bioimage analysis

Image illustrating algorithm

Python tool that allows users to quickly view and explore microscopy data; generate reproducible analyses, encoding a complete history of image transformations from raw data to final result; and scale up analyses from initial exploration to high throughput processing pipelines, with a minimal amount of extra effort.

Project supporting

  • Tjelvar Olsson
  • Matthew Hartley